He is essentially the same as the Squidward in the normal universe, having no true differences from the normal one.
Plankton and Mr. Krabs switch lives due to Plankton's new device allowing the changing of bodies. After Squidward complains about SpongeBob being the co-cashier, Plankton gives Squidward the job of being a fry cook. While being the fry cook, Squidward can be seen creating a krabby patty for a customer in which the krabby patty looks unsatisfactory. The customer then shows up a digusting version of a Krabby Patty, in which Plankton accuses Squidward because he is the new fry cook.
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